For the last part of the analysis, we are going to simply take all of the z-maps we have just created, and enter them into a second-level analysis across all subjects. To do this, first I suggest creating separate directories for the Autism and Control subjects, based on the phenotypic data provided by the KKI on the ABIDE website; once you have those, run uber_ttest.py to begin loading Z-maps from each subject into the corresponding category of Autism or Control.
Most of this is easier to see than to describe, so I've made a final tutorial video to show how this is all done. Hope it helps!
P.S. I've collated all of the past videos over the past week and a half into a playlist, which should make sorting through everything slightly easier:
Your posts are excellent - thanks for doing them and for the extra laughs thrown in between!
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